Genetic variation,inheritance, and quaternary structure of malic enzyme in brook trout (Salvelinus fontinalis)

Electrophoretic variation is described for malic enzyme (ME) for the first time in brook trout (Salvelinus fontinalis). Since the quaternary structure of ME was not clear from examination of banding patterns in brook trout alone, ME phenotypes in rainbow trout (Salmo gairdneri) × brook trout hybrids as well as in esocid species demonstrated that ME is tetrameric. A model of two duplicated loci is proposed to account for the observed variation. One locus (ME-2) is fixed and one locus (ME-1) is variable with three electrophoretically distinct alleles; the protein products of ME-1 are reduced in activity relative to the protein products of ME-2. Joint segregation was examined between ME-1 and ten other biochemical loci in brook trout, and between ME-1, ME-2, and nine other biochemical loci in a splake—lake trout (Salvelinus namaycush) × brook trout hybrid—backcross. All pairwise examinations showed random assortment except ME-2 with an isocitrate dehydrogenase locus (IDH-3), which showed complete linkage in the splake backcross. This may be due to a chromosomal aberration.Authorized for publication as Paper No. 5599 in the Journal Series of The Pennsylvania Agricultural Experiment Station, University Park, Pennsylvania, in cooperation with the Benner Spring Fish Research Station, The Pennsylvania Fish Commission, Bellefonte, Pennsylvania. M.S. was supported by an NSF Graduate Fellowship.     

扎龙湿地藻类优势种生态位及其种间联结性动态分析

为了解扎龙湿地藻类群落结构的季节特征和演替规律，对扎龙湿地藻类群落进行了分析，主要涉及藻类优势度、生态位、MFG功能群划分、生态位重叠值及联结系数分析。结果表明：(1)在检出的8门311种藻类中，夏季种类丰富度最高，全年优势种为狭形纤维藻和啮蚀隐藻。(2)优势种种类和密度季节性差异较大，春季以金藻-绿藻种类为主，夏季以绿藻-隐藻种类为主，秋季以隐藻-绿藻种类为主。(3)生态位宽度值与MFG功能群划分结合分析表明，优势种可分为3个大类别，不同种类对资源利用情况的差异较大，各季节广生态位种能较好的反映扎龙湿地水体环境的季节变化趋势。(4)生态位重叠值在不同季节上有较大差异，O_ik>0.6的占比分别为42.86%(春)、28.57%(夏)和25.00%(秋),表明春季优势种种间资源的竞争最为突出，种间竞争强于夏、秋两季。(5)种间联结性检验结果显示，扎龙湿地藻类优势种间总体联结上呈正关联关系，但是种间联结较为松散，种与种之间相对独立。研究表明，扎龙湿地藻类群落结构生态位测度均存在明显的季节波动，较好反映出水环境季节变化特征，可用来指示湿地水体环境的变化。     

Formation of Human Neuroblastoma in Mouse-Human Neural Crest Chimeras

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Efficient Plant Gene Identification Based on Interspecies Mapping of Full-Length cDNAs

We present an annotation pipeline that accurately predicts exon–intron structures and protein-coding sequences (CDSs) on the basis of full-length cDNAs (FLcDNAs). This annotation pipeline was used to identify genes in 10 plant genomes. In particular, we show that interspecies mapping of FLcDNAs to genomes is of great value in fully utilizing FLcDNA resources whose availability is limited to several species. Because low sequence conservation at 5′- and 3′-ends of FLcDNAs between different species tends to result in truncated CDSs, we developed an improved algorithm to identify complete CDSs by the extension of both ends of truncated CDSs. Interspecies mapping of 71 801 monocot FLcDNAs to the Oryza sativa genome led to the detection of 22 142 protein-coding regions. Moreover, in comparing two mapping programs and three ab initio prediction programs, we found that our pipeline was more capable of identifying complete CDSs. As demonstrated by monocot interspecies mapping, in which nucleotide identity between FLcDNAs and the genome was ∼80%, the resultant inferred CDSs were sufficiently accurate. Finally, we applied both inter- and intraspecies mapping to 10 monocot and dicot genomes and identified genes in 210 551 loci. Interspecies mapping of FLcDNAs is expected to effectively predict genes and CDSs in newly sequenced genomes.     

Generation of Functional Organs Using a Cell-Competitive Niche in Intra- and Inter-species Rodent Chimeras

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